분류 전체보기(77)
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arguments_python
https://youtu.be/e0hEA69d4Dw?si=kxRGgjfNy1lHovA7 https://youtu.be/Raxp3-TustE?si=Jjfdq9t-c4jhVsQS https://youtu.be/HlUWhxhC16w?si=LQC-YE_I6fbb0rQr
2024.12.13 -
Bio Python example code
import Bioprint(Bio.__doc__)Collection of modules for dealing with biological data in Python.The Biopython Project is an international association of developersof freely available Python tools for computational molecular biology.http://biopython.orgDNA sequence handlingfrom Bio import Entrezfrom Bio import SeqIOEntrez.email = "A.N.Other@example.com"with Entrez.efetch( db="nucleotide", rettype..
2024.11.27 -
Python-Basic
Python has 6 data typesNumeric Types: int (integer), float (decimal), complex (complex number)Sequence Types: str(string), list(list), tuple(tuple)Mapping Type: dictSet Types: setBoolean Type: bool (Boolean)Binary Types: bytes, bytearray, memoryview✍🏻 python# 데이터 타입v_str1 = "Niceman" #strv_str2 = "Goodgirl" #strv_bool = True #boolv_float = 10.3 #floatv_int = 7 #intv_complex = 3 + 3jv_dict = { ..
2024.11.27 -
biopython
1. Parsing: Import the desired part from information such as FASTA, FASTQ, GenBank, KEGG, etc.2. Handle the sequence information that was parsed as string and character3. Information on the web such as NCBI, ExPASy, etc. can be imported, so information processing is easy.4. BLAST, sequence alignment, etc. can be analyzed.
2024.11.27 -
drug targets
What is medicine?1-1 Definition of DrugsSubstances that enter in vivo and have biological effectsex) Caffeine, nicotine, alcohol can also be a medicineIt should be borne in mind that there are differences in effects for each substance.It can be poisonous when used at high doses for a long time.1-2 Good DrugDrugs exhibiting desired activity and free from toxicity and side effectsSince drugs have ..
2024.11.27 -
python libraries
Anaconda: Used for utilizing Python virtual environments. It is not limited to bioinformatics but is useful in many cases of data science. It is possible to create a virtual environment and manage the version of each package in that environment. Below are conda channels useful for bioinformatics.- bioconda- conda-forgepandas, numpy: useful for storing and processing data in the form of Excel-lik..
2024.11.27